January 2003, Issue 4

Protein arrays: The current state-of-the-art Cutler P Proteomics 2003 Jan;3(1):3-18 Proteome analysis on an early transformed human bronchial epithelial cell line, BEP2D, after alpha-particle irradiation Ying W, Zhang K, Qian X, Xie L, Wang J, Xiang X, Cai Y, Wu D. Proteomics 2003 Jan;3(1):64-72 Transcriptome profile of murine gammaherpesvirus-68 lytic infection Ebrahimi B, Dutia BM, Roberts KL, Garcia-Ramirez JJ, Dickinson P, Stewart JP, Ghazal P, Roy DJ, Nash AA J Gen Virol 2003 Jan;84(Pt 1):99-109 Proteome analysis reveals phosphorylation of ATP synthase beta -subunit in human skeletal muscle and proteins with potential roles in type 2 diabetes Hojlund K, Wrzesinski K, Mose Larsen P, Fey SJ, Roepstorff P, Handberg A, Dela F, Vinten J, McCormack JG, Reynet C, Beck-Nielsen H J Biol Chem 2003 Jan 16; [epub ahead of print] Topology models for 37 Saccharomyces cerevisiae membrane proteins based on C-terminal reporter fusions and prediction Kim H, Melen K, Von Heijne G J Biol Chem 2003 Jan 10; [epub ahead of print] The Proteome Analysis database: a tool for the in silico analysis of whole proteomes Pruess M, Fleischmann W, Kanapin A, Karavidopoulou Y, Kersey P, Kriventseva E, Mittard V, Mulder N, Phan I, Servant F, Apweiler R Nucleic Acids Res 2003 Jan 1;31(1):414-7 The Nuclear Protein Database (NPD): sub-nuclear localisation and functional annotation of the nuclear proteome Dellaire G, Farrall R, Bickmore WA Nucleic Acids Res 2003 Jan 1;31(1):328-30 Proteome analysis of Escherichia coli K-12 by two-dimensional native-state chromatography and MALDI-MS Champion MM, Campbell CS, Siegele DA, Russell DH, Hu JC Mol Microbiol 2003 Jan;47(2):383-96 Exploring protein-protein interactions with phage display Sidhu SS, Fairbrother WJ, Deshayes K Chembiochem 2003 Jan 3;4(1):14-25 Whole-proteome interaction mining Bock JR, Gough DA Bioinformatics 2003 Jan;19(1):125-34 Direct identification of proteins in ultracomplex mixtures. Applications to proteome analysis Schieltz DM, Yates JR 3rd Methods Mol Biol 2003;211:235-45 Transcriptional regulation and signature patterns revealed by microarray analyses of Streptococcus pneumoniae R6 challenged with sublethal concentrations of translation inhibitors Ng WL, Kazmierczak KM, Robertson GT, Gilmour R, Winkler ME J Bacteriol 2003 Jan;185(1):359-70 The global transcriptional response of Bacillus subtilis to peroxide stress is coordinated by three transcription factors Helmann JD, Wu MF, Gaballa A, Kobel PA, Morshedi MM, Fawcett P, Paddon C J Bacteriol 2003 Jan;185(1):243-53 Transcriptome analysis of Neisseria meningitidis during infection Dietrich G, Kurz S, Hubner C, Aepinus C, Theiss S, Guckenberger M, Panzner U, Weber J, Frosch M J Bacteriol 2003 Jan;185(1):155-64 IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains Lefranc MP, Pommie C, Ruiz M, Giudicelli V, Foulquier E, Truong L, Thouvenin-Contet V, Lefranc G Dev Comp Immunol 2003 Jan;27(1):55-77